Algorithm development status

This is a roadmap of the algorithms that are to be implemented in vantage6.

Descriptive statistics

Description	Horizontal	Vertical	Language
Mean	✅		Python
Standard deviation	✅		Python
IQR count	✅		Python
Percentages	✅		Python
Median	✅		Python
Minimum	✅		Python
Maximum	✅		Python
Contingency tables	✅		Python
Proportion
Odds ratio
Hessian Matrix	🏗		Python
Propensity Score Stratification	✅		R
Age Standardized Incidence Rate	✅		Python

Visualization

Description	Horizontal	Vertical	Language
Histogram	✅		Python
Contour plot
Heat map
Scatter plot
Box plot
Violin plot

Hypothesis tests

Description	Horizontal	Vertical	Language
T-test	✅		Python
Chi-square	✅		R
Z-test
ANOVA	🏗		Python
Fisher's Exact test	🏗		Python
Pearson Correlation
Log-Rank test
Wald test

Variable selection

Description	Horizontal	Vertical	Language
AIC
Likelihood Ratio test

Models

Description	Horizontal	Vertical	Language
Linear Regression	✅		R
Logistic Regression	✅		R
GLM	✅		R
GLMM	🏗		R

Survival models

Description	Horizontal	Vertical	Language
Kaplan Meier
Cox Proportional Hazards Regression	✅		R
Partial Likelihood Estimates